DORIS Software. New Tool to Process Sound Velocity Profiles

Hydrographic and geosciences surveys, using acoustic devices, need to use accurate water sound velocity profiles. Because the acoustic path depends on the sound velocity profile (SVP), the use of the most accurate SVP is one of the keys to conducting effective surveys (with multibeams, for instance). To date, the existing software available does not answer to both the needs of efficiency and simplicity (sometimes not so easy to operate, sometimes not so accurate). DORIS provides a handy freeware to post-process SVP for the hydrographic communities.

High protein flexibility and reduced hydration water dynamics are key pressure adaptive strategies in prokaryotes

Water and protein dynamics on a nanometer scale were measured by quasi-elastic neutron scattering in the piezophile archaeon Thermococcus barophilus and the closely related pressure-sensitive Thermococcus kodakarensis, at 0.1 and 40 MPa. We show that cells of the pressure sensitive organism exhibit higher intrinsic stability. Both the hydration water dynamics and the fast protein and lipid dynamics are reduced under pressure. In contrast, the proteome of T. barophilus is more pressure sensitive than that of T. kodakarensis. The diffusion coefficient of hydration water is reduced, while the fast protein and lipid dynamics are slightly enhanced with increasing pressure. These findings show that the coupling between hydration water and cellular constituents might not be simply a master-slave relationship. We propose that the high flexibility of the T. barophilus proteome associated with reduced hydration water may be the keys to the molecular adaptation of the cells to high hydrostatic pressure.